Large size of outputs in command

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Joined: 12/12/2012

Hi everybody.
I have a serious problem with scale of outputs with the command. I need only the .Det file between outputs, but I have some uncalled-for files in the results when I run the program. Suppose that I have 1000 sequences with 500-1000 nts length; I need about 16 hours(each time) for analyzing, and after that, the bulk results are several Gigs! The more sequences, the more memory needs.

The question is:
Is it possible to limit the output files of this command? If Yes, how?
If No, how I can fix this problem?

I'll be thankful if one of you can help me :)